Get expression of gene by indices in a dds
Usage
get_gene_expression(dds, gene_indices, assay)
Arguments
- dds
A DESeqDataSet
- gene_indices
integer vector that refer to the row number of genes to
retrieve
- assay
integer, assay index that refers to the desired expression data
slot
Value
A dataframe where row names are sample names, and column names are
gene names
Details
Importantly, returns data as a data.frame without dropping
dimensions.
